Small RNA Similarity Analysis

This tool is useful for comparisons of small RNA sequences to rapidly find near matches or homologs of microRNAs and other plant small RNAs. It uses a set of user-input sequences and identifies highly similar small RNAs in a selected database.

Choose expression db

Choose read type
Search for matches in only genome-matched reads
Search for matches in both genome-matched and unmatched reads

EITHER select candidate miRNAs from an organism

OR specify your own tags
Enter your fasta format input

Upload your fasta format file

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